Some are still open and working as far as I know. Best thing to do is check the reviews here and see when they last got reviewed if you know a place you want to go. Otherwise the city paper is a good place to look if you know which section to look in although its not very hard to guess which one.

It's touch and go, I have seen several places close recently and a couple that were to open, get delayed or never open.

Kyoto is still open

While kyoto is still open they seem reluctant to have new visitors. I went recently and reviewed them here on naughty. You can find my review under their section and I will forewarn you that while it is a negative review for them it is an honest retelling of the events that transpired while I was there. It seems like their treatment of me has happened to others in the past so I think it may be safe to say that if it happens to you don't be surprised. Who knows maybe they got a tip about le checking them out and are just being careful until they get an all clear for their source.